Items where Author is "Uhrmacher, Adelinde M."

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Article

Helms, Tobias and Warnke, Tom and Maus, Carsten and Uhrmacher, Adelinde M. (2017) Semantics and Efficient Simulation Algorithms of an Expressive Multi-Level Modeling Language. ACM Transactions on Modeling and Computer Simulation (TOMACS), 27 (2). 8-1-8-25. ISSN 1049-3301 (print) 1558-1195 (online)

Peng, Danhua and Warnke, Tom and Haack, Fiete and Uhrmacher, Adelinde M. (2017) Reusing simulation experiment specifications in developing models by successive composition — a case study of the Wnt/β-catenin signaling pathway. Simulation: Transactions of the Society for Modeling and Simulation International. pp. 1-20. ISSN 0037-5497 (online 1741-3133)

Warnke, Tom and Reinhardt, Oliver and Klabunde, Anna and Willekens, Frans and Uhrmacher, Adelinde M. (2017) Modelling and Simulating Decision Processes of Linked Lives - An Approach Based on Concurrent Processes and Stochastic Race. Population Studies. (In Press)

Luo, Jiankai and Talabattula, Venkata Ajay Narendra and Morgan, Peter and Frech, Moritz and Uhrmacher, Adelinde M. and Herchenröder, Ottmar and Pützer, Brigitte M. and Rolfs, Arndt (2017) Non-canonical pathway induced by Wnt3a regulates β-catenin via Pyk2 in differentiating human neural progenitor cells. Biochemical and Biophysical Research Communications. (In Press)

Peng, Danhua and Warnke, Tom and Haack, Fiete and Uhrmacher, Adelinde M. (2016) Reusing simulation experiment specifications to support developing models by successive extension. Simulation Modelling Practice and Theory, 68. pp. 33-53. ISSN 1569190X

Steiniger, Alexander and Uhrmacher, Adelinde M. (2016) Intensional Couplings in Variable-Structure Models: An Exploration Based on Multilevel-DEVS. ACM Trans. Model. Comput. Simul., 26 (2).

Bittig, Arne T. and Uhrmacher, Adelinde M. (2016) ML-Space: Hybrid Spatial Gillespie and Particle Simulation of Multi-level Rule-based Models in Cell Biology. IEEE/ACM Transactions on Computational Biology and Bioinformatics, PP (99). pp. 1-16. ISSN 1545-5963

Helms, Tobias and Ewald, Roland and Rybacki, Stefan and Uhrmacher, Adelinde M. (2015) Automatic Runtime Adaptation for Component-Based Simulation Algorithms. ACM Trans. Model. Comput. Simul., 26 (1). 7:1-7:24.

Haack, Fiete and Lemcke, Heiko and Ewald, Roland and Rharass, Tareck and Uhrmacher, Adelinde M. (2015) Spatio-temporal Model of Endogenous ROS and Raft-Dependent WNT/Beta-Catenin Signaling Driving Cell Fate Commitment in Human Neural Progenitor Cells. PLoS Computational Biology, 11 (3).

Peng, Danhua and Warnke, Tom and Uhrmacher, Adelinde M. (2015) Domain-Specific Languages for Flexbily Experimenting with Stochastic Models. SNE Simulation Notes Europe, 25 (2). pp. 117-122. ISSN 2305-9974

Guo, Gang and Bittig, Arne T. and Uhrmacher, Adelinde M. (2015) Lattice Monte Carlo simulation of Galilei variant anomalous diffusion. J. Comput. Physics, 288. pp. 167-180.

Kossow, Christina and Rybacki, Stefan and Millat, Thomas and Rateitschak, Katja and Jaster, Robert and Uhrmacher, Adelinde M. and Wolkenhauer, Olaf (2015) An explicit numerical scheme to efficiently simulate molecular diffusion in environments with dynamically changing barriers. Mathematical and Computer Modelling of Dynamical Systems, 21 (6). pp. 535-559.

Leye, Stefan and Ewald, Roland and Uhrmacher, Adelinde M. (2014) Composing Problem Solvers for Simulation Experimentation: A Case Study on Steady State Estimation. PLoS ONE, 9 (4). e91948. ISSN 1932-6203

Bittig, Arne T. and Matschegewski, Claudia and Nebe, J. Barbara and Stählke, Susanne and Uhrmacher, Adelinde M. (2014) Membrane related dynamics and the formation of actin in cells growing on micro-topographies: a spatial computational model. BMC Systems Biology, 8. p. 106.

Ewald, Roland and Uhrmacher, Adelinde M. (2014) SESSL: A domain-specific language for simulation experiments. ACM Trans. Model. Comput. Simul., 24 (2). p. 11.

John, Mathias and Schulz, Hans-Jörg and Schumann, Heidrun and Uhrmacher, Adelinde M. and Unger, Andrea (2013) Constructing and visualizing chemical reaction networks from pi-calculus models. Formal Aspects of Computing, 25 (5). pp. 723-742. ISSN 0934-5043

Zinn, Sabine and Himmelspach, Jan and Uhrmacher, Adelinde M. and Gampe, Jutta (2013) Building Mic-Core, a Specialized M&S Software to Simulate Multi-State Demographic Micro Models, Based on JAMES II, a General M&S Framework. J. Artificial Societies and Social Simulation, 16 (3).

Haack, Fiete and Burrage, Kevin and Redmer, Ronald and Uhrmacher, Adelinde M. (2013) Studying the Role of Lipid Rafts on Protein Receptor Bindings with Cellular Automata. IEEE/ACM Trans. Comput. Biology Bioinform., 10 (3). pp. 760-770.

Mazemondet, Orianne and John, Mathias and Leye, Stefan and Rolfs, Arndt and Uhrmacher, Adelinde M. (2012) Elucidating the Sources of β-Catenin Dynamics in Human Neural Progenitor Cells. PLoS ONE, 7 (8). e42792. ISSN 1932-6203

Maus, Carsten and Rybacki, Stefan and Uhrmacher, Adelinde M. (2011) Rule-based multi-level modeling of cell biological systems. BMC Systems Biology, 5 (166). ISSN 1752-0509 (electronic version)

Mazemondet, Orianne and Hubner, Rayk and Frahm, Jana and Koczan, Dirk and Bader, Benjamin and Weiss, Dieter and Uhrmacher, Adelinde M. and Frech, Moritz and Rolfs, Arndt and Luo, Jiankai (2011) Quantitative and kinetic profile of Wnt/β-catenin signaling components during human neural progenitor cell differentiation. Cellular and Molecular Biology Letters, 16 (4). pp. 515-538. ISSN 1689-1392

Jeschke, Matthias and Ewald, Roland and Uhrmacher, Adelinde M. (2011) Exploring the performance of spatial stochastic simulation algorithms. J. Comput. Physics, 230 (7). pp. 2562-2574. ISSN 0021-9991

John, Mathias and Lhoussaine, Cédric and Niehren, Joachim and Uhrmacher, Adelinde M. (2010) The Attributed Pi-Calculus with Priorities. Trans. Computational Systems Biology, 12. pp. 13-76.

Himmelspach, Jan and Röhl, Mathias and Uhrmacher, Adelinde M. (2010) Component-Based Models and Simulations for Supporting Valid Multi-Agent System Simulations. Applied Artificial Intelligence, 24 (5). pp. 414-442. ISSN 0883-9514 (print) 1087-6545 (online)

Ewald, Roland and Himmelspach, Jan and Jeschke, Matthias and Leye, Stefan and Uhrmacher, Adelinde M. (2010) Flexible experimentation in the modeling and simulation framework JAMES II - implications for computational systems biology. Briefings in Bioinformatics, 11 (3). pp. 290-300. ISSN 1467-5463

Chen, Dan and Ewald, Roland and Theodoropoulos, Georgios K. and Minson, Rob and Oguara, Ton and Lees, Michael and Logan, Brian S. and Uhrmacher, Adelinde M. (2008) Data access in distributed simulations of multi-agent systems. Journal of Systems and Software, 81 (12). pp. 2345-2360.

John, Mathias and Ewald, Roland and Uhrmacher, Adelinde M. (2008) A Spatial Extension to the π Calculus. Electr. Notes Theor. Comput. Sci., 194 (3). pp. 133-148.

Jeschke, Matthias and Ewald, Roland and Park, Alfred and Fujimoto, Richard and Uhrmacher, Adelinde M. (2008) A parallel and distributed discrete event approach for spatial cell-biological simulations. SIGMETRICS Performance Evaluation Review, 35 (4). pp. 22-31.

Ewald, Roland and Maus, Carsten and Rolfs, Arndt and Uhrmacher, Adelinde M. (2007) Discrete event modelling and simulation in systems biology. Journal of Simulation, 1 (2). pp. 81-96. ISSN 1747-7778

Hoffrogge, Raimund and Beyer, Susanne and Hübner, Rayk and Mikkat, Stefan and Mix, Eilhard and Scharf, Christian and Schmitz, Ulf and Pauleweit, Stefan and Berth, Matthias and Zubrzycki, Igor Z. and Christoph, Hilmar and Pahnke, Jens and Wolkenhauer, Olaf and Uhrmacher, Adelinde M. and Völker, Uwe and Rolfs, Arndt (2007) 2-DE profiling of GDNF overexpression-related proteome changes in differentiating ST14A rat progenitor cells. PROTEOMICS, 7 (1). pp. 33-46. ISSN 16159853

Ewert, Ulf Christian and Röhl, Mathias and Uhrmacher, Adelinde M. (2007) Hunger and market dynamics in pre-modern communities : insights into the effects of market intervention from a multi-agent model. Historical Social Research, 32 (4). pp. 122-150. ISSN 0172-6404

Helleboogh, Alexander and Vizzari, Giuseppe and Uhrmacher, Adelinde M. and Michel, Fabien (2007) Modeling dynamic environments in multi-agent simulation. Autonomous Agents and Multi-Agent Systems, 14 (1). pp. 87-116.

Hoffrogge, Raimund and Beyer, Susanne and Völker, Uwe and Uhrmacher, Adelinde M. and Rolfs, Arndt (2006) 2-DE Proteomic Profiling of Neuronal Stem Cells. Neurodegenerative Diseases, 3 (1-2). pp. 112-121. ISSN 1660-2854

Hoffrogge, Raimund and Mikkat, Stefan and Scharf, Christian and Beyer, Susanne and Christoph, Hilmar and Pahnke, Jens and Mix, Eilhard and Berth, Matthias and Uhrmacher, Adelinde M. and Zubrzycki, Igor Z. and Miljan, Erik and Völker, Uwe and Rolfs, Arndt (2006) 2-DE proteome analysis of a proliferating and differentiating human neuronal stem cell line (ReNcell VM). PROTEOMICS, 6 (6). pp. 1833-1847. ISSN 1615-9853

Uhrmacher, Adelinde M. and Degenring, Daniela and Zeigler, Bernard P. (2005) Discrete Event Multi-level Models for Systems Biology. Trans. Computational Systems Biology, 1. pp. 66-89.

Uhrmacher, Adelinde M. and Röhl, Mathias and Kullick, Bernd G. (2002) The Role Of Reflection In Simulating And Testing Agents: An Exploration Based On The Simulation System James. Applied Artificial Intelligence, 16 (9-10). pp. 795-811.

Uhrmacher, Adelinde M. (2001) Dynamic structures in modeling and simulation: a reflective approach. ACM Trans. Model. Comput. Simul., 11 (2). pp. 206-232.

Schattenberg, Bernd and Uhrmacher, Adelinde M. (2001) Planning agents in JAMES. Proceedings of the IEEE, 89 (2). pp. 158-173. ISSN 00189219

Elwert, Ulf C. and Röhl, Mathias and Uhrmacher, Adelinde M. (2001) The Role of Deliberative Agents in Analyzing Crises Management in Pre-modern Towns. Sozionik, 3 (5). 5:1-5:15.

Uhrmacher, Adelinde M. and Seitz, Alexander (2000) Case-based simulation of ecological and biological systems. Systems Analysis Modelling Simulation - Special issue on tools for model conceptualisation and simulation for environment analyses, 39 (2). pp. 215-234. ISSN 0232-9298

Uhrmacher, Adelinde M. and Tyschler, Petra and Tyschler, Dirk (2000) Modeling and simulation of mobile agents. Future Generation Comp. Syst., 17 (2). pp. 107-118.

Seitz, Alexander and Uhrmacher, Adelinde M. and Damm, Daniela (1999) Case-based prediction in experimental medical studies. Artificial Intelligence in Medicine, 15 (3). pp. 255-273.

Uhrmacher, Adelinde M. and Cellier, François E. and Frye, R.J. (1997) Applying fuzzy-based inductive reasoning to analyze qualitatively the dynamic behavior of an ecological system. AI Applications, 11 (2). pp. 1-10. ISSN 1051-8266

Uhrmacher, Adelinde M. (1997) Concepts of Object- and Agent-Oriented Simulation. Transactions of the Society for Computer Simulation International, 14 (2). pp. 59-67. ISSN 0740-6797

Uhrmacher, Adelinde M. and Zeigler, Bernard P. (1996) Variable Structure Models In Object-oriented Simulation. International Journal of General Systems, 24 (4). pp. 359-375. ISSN 0308-1079

Uhrmacher, Adelinde M. (1995) Reasoning about changing structure: a modeling concept for ecological systems. Applied Artificial Intelligence, 9 (2). pp. 157-180.

Book Section

Uhrmacher, Adelinde M. and Himmelspach, Jan and Ewald, Roland (2010) Effective and Efficient Modeling and Simulation with DEVS Variants. In: Discrete-Event Modeling and Simulation. CRC Press, pp. 139-176. ISBN 978-1-4200-7233-4 (print) 978-1-4200-7234-1 (eBook)

Tolk, Andreas and Uhrmacher, Adelinde M. (2009) Agents: Agenthood, Agent Architectures, and Agent Taxonomies. In: Agent-Directed Simulation and Systems Engineering. Wiley-VCH Verlag GmbH & Co. KGaA, pp. 73-109. ISBN Print ISBN: 9783527407811 Online ISBN: 9783527627783

Röhl, Mathias and Uhrmacher, Adelinde M. (2007) Agent-Oriented Modeling in Simulation: Agents for Modeling, and Modeling for Agents. In: Handbook of Dynamic System Modeling. Computer ana Information Science . Chapman & Hall/CRC, pp. 8-1. ISBN 978-1-58488-565-8 (print) 978-1-4200-1085-5 (eBook)

Uhrmacher, Adelinde M. and Swartout, William (2003) Agent-Oriented Simulation. In: Applied System Simulation: Methodologies and Applications. Springer US, pp. 215-239. ISBN 978-1-4613-4843-6 (print) 978-1-4419-9218-5(online)

Uhrmacher, Adelinde M. (2001) A System Theoretic Approach to Constructing Test Beds for Multi-Agent Systems. In: Discrete Event Modeling and Simulation Technologies.A Tapestry of Systems and AI-Based Theories and Methodologies. Springer-Verlag New York, pp. 315-339. ISBN 978-1-4419-2868-9 (Print) 978-1-4757-3554-3 (Online)

Uhrmacher, Adelinde M. (2000) Agentenorientierte Simulation. In: Modellierung, Simulation und Künstliche Intelligenz. SCS-Europe, pp. 15-45. ISBN 978-1565551282

Uhrmacher, Adelinde M. (1996) Object-Oriented and Agent-Oriented Simulation: Implications for Social Science Application. In: Social Science Microsimulation. Chapter 20. Springer, Berlin Heidelberg, pp. 432-447. ISBN 978-3-540-61572-9

Uhrmacher, Adelinde M. (1992) EMSY-An Extended Modeling System. In: Artificial Intelligence, Expert Systems and Symbolic Computing. North Holland, Amsterdam, pp. 399-407. ISBN 978-0444568359

Monograph

Leye, Stefan and Priami, Corrado and Uhrmacher, Adelinde M. (2007) A Parallel Beta-binders Simulator. Technical Report. The Microsoft Research - University of Trento, Centre for Computational and Systems Biology.

Conference or Workshop Item

Reinhardt, Oliver and Uhrmacher, Adelinde M. (2017) An Efficient Simulation Algorithm for Continuous-Time Agent-Based Linked Lives Models. In: 2017 Spring Simulation Multi-Conference, April 23-26, 2017, Virginia Beach, Virginia, USA.

Köster, Till and Perumalla, Kalyan and Uhrmacher, Adelinde M. (2017) Efficient Simulation of Nested Hollow Sphere Intersections for Dynamically Nested Compartmental Models in Cell Biology. In: SIGSIM Principles of Advanced Discrete Simulation, SIGSIM-PADS '17. (In Press)

Ruscheinski, Andreas and Uhrmacher, Adelinde M. (2017) Provenance in Modeling and Simulation Studies - Bridging Gaps. In: Winter Simulation Conference 2017. (In Press)

Warnke, Tom and Roesicke, Lars and Schulz, Hans-Jörg and Uhrmacher, Adelinde M. (2017) Simulation Galleries - Combining Experiment Design and Visual Analytics. In: INFORMS Simulation Society 2017 Research Workshop. (In Press)

Helms, Tobias and Mentel, Steffen and Uhrmacher, Adelinde M. (2016) Dynamic State Space Partitioning for Adaptive Simulation Algorithms. In: 9th EAI International Conference on Performance Evaluation Methodologies and Tools, 14th-16th Dec 2015, Berlin, Germany.

Kossow, Christina and Helms, Tobias and Kreutzer, Jan M. and Martens, Alke and Uhrmacher, Adelinde M. (2016) Evaluating Different Modeling Languages Based on a User Study. In: Proceedings of the SpringSim'16 Spring Simulation Multi-Conference, 3.-6. April, 2016, Pasadena, CA, USA.

Uhrmacher, Adelinde M. and Brailsford, Sally and Liu, Jason and Rabe, Markus and Tolk, Andreas (2016) Panel — Reproducible research in discrete event simulation — A must or rather a maybe? In: Winter Simulation Conference 2016, December 11-14, Washington, DC, USA.

Warnke, Tom and Reinhardt, Oliver and Uhrmacher, Adelinde M. (2016) Population-based CTMCs and Agent-based Models. In: Winter Simulation Conference 2016, December 11-14, Washington, DC, USA.

Warnke, Tom and Uhrmacher, Adelinde M. (2016) Spatiotemporal Pattern Matching in RoboCup. In: German Conference on Multiagent System Technologies (MATES) 2016, 27.-30. September, 2016, Klagenfurt, Austria.

Schützel, Johannes and Stieber, Sebastian and Haubelt, Christian and Uhrmacher, Adelinde M. (2015) Targeted on-line data extraction with SystemXtract. In: Proceedings of the 8th International Conference on Simulation Tools and Techniques, Athens, Greece, August 24-26, 2015.

Helms, Tobias and Reinhardt, Oliver and Uhrmacher, Adelinde M. (2015) Bayesian changepoint detection for generic adaptive simulation algorithms. In: Proceedings of the 48th Annual Simulation Symposium, ANSS 2015, part of the 2015 Spring Simulation Multiconference, SpringSim '15, Alexandria, VA, USA, April 12-15, 2015.

Warnke, Tom and Peng, Danhua and Uhrmacher, Adelinde M. (2015) Domain-Specific Languages for Flexibly Experimenting With Models. In: Workshop der ASIM/GI-Fachgruppen STS (Simulation Technischer Systeme) und GMMS (Grundlagen und Methoden in Modellbildung und Simulation), June 18-19, Stralsund, Germany.

Pierce, Maria E. and Warnke, Tom and Helms, Tobias and Uhrmacher, Adelinde M. and Krumme, Uwe and Hammer, Cornelius (2015) Individual-based cod simulation with ML-Rules. In: Proceedings of the 2015 Winter Simulation Conference, Huntington Beach, CA, USA, December 6-9, 2015.

Warnke, Tom and Steiniger, Alexander and Uhrmacher, Adelinde M. and Klabunde, Anna and Willekens, Frans (2015) ML3: a language for compact modeling of linked lives in computational demography. In: Proceedings of the 2015 Winter Simulation Conference, Huntington Beach, CA, USA, December 6-9, 2015.

Warnke, Tom and Klabunde, Anna and Plath, Sebastian and Reinhardt, Oliver and Willekens, Frans and Uhrmacher, Adelinde M. (2015) Modelling and Simulating Decision Processes with a Domain Specific Language. In: Workshop: The science of choice - How to model the decision-making process?, October 28-30, Rostock, Germany.

Uhrmacher, Adelinde M. (2015) The Role of Domain Specific Languages in Modeling and Simulation. In: SIMULTECH 2015 - Proceedings of the 5th International Conference on Simulation and Modeling Methodologies, Technologies and Applications, Colmar, Alsace, France, 21 - 23 July, 2015..

Warnke, Tom and Helms, Tobias and Uhrmacher, Adelinde M. (2015) Syntax and Semantics of a Multi-Level Modeling Language. In: Proceedings of the 3rd ACM SIGSIM Conference on Principles of Advanced Discrete Simulation.

Schützel, Johannes and Uhrmacher, Adelinde M. (2015) Targeted Extraction of Simulation Data. In: 19th IEEE/ACM International Symposium on Distributed Simulation and Real Time Applications, DS-RT 2015, Chengdu, China, October 14-16, 2015.

Warnke, Tom and Uhrmacher, Adelinde M. (2014) An Approach for Spatial Pattern Matching in Simulation Trajectories. In: WSC'14 Winter Simulation Conference, December 07-10, Savannah, GA, USA.

Rybacki, Stefan and Haack, Fiete and Wolf, Karsten and Uhrmacher, Adelinde M. (2014) Developing simulation models - from conceptual to executable model and back - an artifact-based workflow approach. In: 7th International ICST Conference on Simulation Tools and Techniques, SIMUTools '14, Lisbon, Portugal, March 17-19, 2014.

Rybacki, Stefan and Helms, Tobias and Moldenhauer, Lars and Uhrmacher, Adelinde M. (2014) GPU-Based Calculation Of Trajectory Similarities. In: WSC'14 Winter Simulation Conference, December 07-10, Savannah, GA, USA.

Helms, Tobias and Uhrmacher, Adelinde M. (2014) Hybrid Execution of Dynamic Rule-based Multi-level Models. In: WSC'14 Winter Simulation Conference, December 07-10, Savannah, GA, USA.

Fishwick, Paul A. and Brailsford, Sally C. and Taylor, Simon J. E. and Tolk, Andreas and Uhrmacher, Adelinde M. (2014) Modeling for everyone: emphasizing the role of modeling in stem education. In: Proceedings of the 2014 Winter Simulation Conference, Savannah, GA, USA, December 7-10, 2014.

Helms, Tobias and Maus, Carsten and Haack, Fiete and Uhrmacher, Adelinde M. (2014) Multi-level modeling and simulation of cell biological systems with ML-rules: a tutorial. In: Proceedings of the 2014 Winter Simulation Conference, Savannah, GA, USA, December 7-10, 2014.

Schützel, Johannes and Peng, Danhua and Uhrmacher, Adelinde M. and Perrone, L. Felipe (2014) Perspectives on languages for specifying simulation experiments. In: Winter Simulation Conference 2014, December 07-10, Savannah, GA, USA.

Bittig, Arne T. and Reinhardt, Florian and Baltrusch, Simone and Uhrmacher, Adelinde M. (2014) Predictive Modelling of Mitochondrial Spatial Structure and Health. In: Computational Methods in Systems Biology - 12th International Conference, CMSB 2014, Manchester, UK, November 17-19, 2014, Proceedings.

Warnke, Tom and Peng, Danhua and Haack, Fiete and Uhrmacher, Adelinde M. (2014) Towards a Language for Specifying Properties of Simulation Trajectories. In: CMSB 2014: 12th International Conference on Computational Methods in Systems Biology, November 17-19, Manchester, UK.

Peng, Danhua and Ewald, Roland and Uhrmacher, Adelinde M. (2014) Towards semantic model composition via experiments. In: SIGSIM Principles of Advanced Discrete Simulation, SIGSIM-PADS '14, May 18-21, Denver, CO, USA.

Steiniger, Alexander and Uhrmacher, Adelinde M. and Zinn, Sabine and Gampe, Jutta and Willekens, Frans (2014) The role of languages for modeling and simulating continuous-time multi-level models in demography. In: Proceedings of the 2014 Winter Simulation Conference, Savannah, GA, USA, December 7-10, 2014.

Schützel, Johannes and Meyer, Holger and Uhrmacher, Adelinde M. (2014) A stream-based architecture for the management and on-line analysis of unbounded amounts of simulation data. In: SIGSIM Principles of Advanced Discrete Simulation, SIGSIM-PADS '14, Denver, CO, USA, May 18-21, 2014.

Helms, Tobias and Luboschik, Martin and Schumann, Heidrun and Uhrmacher, Adelinde M. (2013) An Approximate Execution of Rule-Based Multi-level Models. In: Computational Methods in Systems Biology - 11th International Conference, CMSB 2013. Proceedings, September 22-24, Klosterneuburg, Austria.

Steiniger, Alexander and Uhrmacher, Adelinde M. (2013) Composing Variable Structure Models - A Revision of COMO. In: SIMULTECH 2013 - Proceedings of the 3rd International Conference on Simulation and Modeling Methodologies, Technologies and Applications, July 29-31, Reykjavik, Iceland.

Nähring, Sebastian and Ewald, Roland and Uhrmacher, Adelinde M. and Maus, Carsten (2013) From standardized modeling formats to modeling languages and back - An exploration based on SBML and ML-Rules. In: Winter Simulations Conference: Simulation Making Decisions in a Complex World, WSC 2013, December 8-11, Washington, DC, USA.

Schützel, Johannes and Ewald, Roland and Uhrmacher, Adelinde M. (2013) Towards a general foundation for formalism-specific instrumentation languages. In: WSC'13 Winter Simulation Conference, December 08-11, Washington D.C., USA.

Peng, Danhua and Steiniger, Alexander and Helms, Tobias and Uhrmacher, Adelinde M. (2013) Towards composing ML-Rules models. In: WSC'13 Winter Simulation Conference, December 08-11, Washington D.C., USA.

Helms, Tobias and Ewald, Roland and Rybacki, Stefan and Uhrmacher, Adelinde M. (2013) A generic adaptive simulation algorithm for component-based simulation systems. In: SIGSIM Principles of Advanced Discrete Simulation, SIGSIM-PADS '13, May 19-22, Montreal, QC, Canada.

Nähring, Sebastian and Maus, Carsten and Ewald, Roland and Uhrmacher, Adelinde M. (2012) Automated transformation between modeling languages with different expressiveness: challenges and results from a use case with SBML and ML-Rules. In: Winter Simulation Conference, WSC '12, Berlin, Germany, December 9-12, 2012.

Leye, Stefan and Uhrmacher, Adelinde M. (2012) GUISE - a tool for GUIding simulation experiments. In: Winter Simulation Conference, WSC '12, December 9-12, Berlin, Germany.

Luboschik, Martin and Maus, Carsten and Schulz, Hans-Jörg and Schumann, Heidrun and Uhrmacher, Adelinde M. (2012) Heterogeneity-based guidance for exploring multiscale data in systems biology. In: 2nd IEEE Symposium on Biological Data Visualization, BioVis 2012, October 14-15, Seattle, WA, USA.

Luboschik, Martin and Rybacki, Stefan and Ewald, Roland and Schwarze, Benjamin and Schumann, Heidrun and Uhrmacher, Adelinde M. (2012) Interactive visual exploration of simulator accuracy: a case study for Stochastic Simulation Algorithms. In: Winter Simulation Conference, WSC '12, December 9-12, Berlin, Germany.

Steiniger, Alexander and Krüger, Frank and Uhrmacher, Adelinde M. (2012) Modeling agents and their environment in multi-level-DEVS. In: Winter Simulation Conference, WSC '12, Berlin, Germany, December 9-12, 2012.

Taylor, Simon J. E. and Fujimoto, Richard and Page, Ernest H. and Fishwick, Paul A. and Uhrmacher, Adelinde M. and Wainer, Gabriel A. (2012) Panel on grand challenges for modeling and simulation. In: Winter Simulation Conference, WSC '12, Berlin, Germany, December 9-12, 2012.

Ewald, Roland and Uhrmacher, Adelinde M. (2012) Setting up simulation experiments with SESSL. In: Winter Simulation Conference, WSC '12, December 9-12, Berlin, Germany.

Uhrmacher, Adelinde M. (2012) Seven pitfalls in modeling and simulation research. In: Winter Simulation Conference, WSC '12, Berlin, Germany, December 9-12, 2012.

Bittig, Arne T. and Uhrmacher, Adelinde M. and Matschegewski, Claudia and Nebe, J. Barbara (2012) Spatial simulation of actin filament dynamics on structured surfaces. In: Winter Simulation Conference, WSC '12, Berlin, Germany, December 9-12, 2012.

Schützel, Johannes and Himmelspach, Jan and Meyer, Holger and Heuer, Andreas and Uhrmacher, Adelinde M. (2012) Streaming data management for the online processing of simulation data. In: Winter Simulation Conference, WSC '12, Berlin, Germany, December 9-12, 2012.

Rybacki, Stefan and Leye, Stefan and Himmelspach, Jan and Uhrmacher, Adelinde M. (2012) Template and Frame Based Experiment Workflows in Modeling and Simulation Software with WORMS. In: Eighth IEEE World Congress on Services, SERVICES 2012, Honolulu, HI, USA, June 24-29, 2012.

Helms, Tobias and Himmelspach, Jan and Maus, Carsten and Oliver, Röwer and Schützel, Johannes and Uhrmacher, Adelinde M. (2012) Toward a language for the flexible observation of simulations. In: Winter Simulation Conference, WSC '12, December 9-12, Berlin, Germany.

Luboschik, Martin and Tominski, Christian and Bittig, Arne T. and Uhrmacher, Adelinde M. and Schumann, Heidrun (2012) Towards Interactive Visual Analysis of Microscopic-Level Simulation Data. In: Proceedings of SIGRAD 2012, Interactive Visual Analysis of Data, November 29-30, Växjö, Sweden.

Rybacki, Stefan and Himmelspach, Jan and Uhrmacher, Adelinde M. (2012) Using workflows to control the experiment execution in modeling and simulation software. In: International ICST Conference on Simulation Tools and Techniques, SIMUTOOLS '12, March 19-23, Sirmione-Desenzano, Italy.

Helms, Tobias and Rybacki, Stefan and Ewald, Roland and Uhrmacher, Adelinde M. (2012) An adaptive simulator for ML-rules. In: Winter Simulation Conference, WSC '12, Berlin, Germany, December 9-12, 2012.

Bittig, Arne T. and Haack, Fiete and Maus, Carsten and Uhrmacher, Adelinde M. (2011) Adapting rule-based model descriptions for simulating in continuous and hybrid space. In: 9th International Conference on Computational Methods in Systems Biology, CMSB 2011, September 21-23, Paris, France.

Maus, Carsten and Rybacki, Stefan and Uhrmacher, Adelinde M. (2011) Formal Rule-based Multi-Level Modeling. In: 12th International Conference on Systems Biology (ICSB-2011), August 28th - September 1st, Heidelberg - Mannheim, Germany.

Wegner, Tim and Gag, Martin and Timmermann, Dirk and Uhrmacher, Adelinde M. (2011) Reduction of Thermal Imbalances and Hot Spots in Networks-on-Chip Using Proactive Temperature Management. In: 5. GI/GMM/ITG-Fachtagung Zuverlässigkeit und Entwurf (ZuE 2011), September 27-29, Hamburg-Harburg, Deutschland.

Schulz, Hans-Jörg and Uhrmacher, Adelinde M. and Schumann, Heidrun (2011) Visual analytics for stochastic simulation in cell biology. In: I-KNOW 2011, 11th International Conference on Knowledge Management and Knowledge Technologies, September 7-9, Graz, Austria.

Rybacki, Stefan and Himmelspach, Jan and Haack, Fiete and Uhrmacher, Adelinde M. (2011) WorMS- a framework to support workflows in M&S. In: Winter Simulation Conference 2011 (WSC 2011), December 11-14, Phoenix, AZ, USA.

Zinn, Sabine and Gampe, Jutta and Himmelspach, Jan and Uhrmacher, Adelinde M. (2010) A DEVS model for demographic microsimulation. In: 2010 Spring Simulation Multiconference, SpringSim 2010, April 11-15, Orlando, Florida, USA.

Himmelspach, Jan and Ewald, Roland and Leye, Stefan and Uhrmacher, Adelinde M. (2010) Enhancing the Scalability of Simulations by Embracing Multiple Levels of Parallelization. In: 2th International Workshop on High Performance Computational Systems Biology, September 30th - October 1st, Twente, The Netherlands.

Steiniger, Alexander and Uhrmacher, Adelinde M. (2010) Modeling and simulation for user assistance in smart environments. In: Proceedings of the 2010 Winter Simulation Conference, WSC 2010, Baltimore, Maryland, USA, 5-8 December 2010.

Leye, Stefan and Mazemondet, Orianne and Uhrmacher, Adelinde M. (2010) Parallel Analysis with FAMVal to Speed Up Simulation-based Model Checking. In: Fourth UKSim European Symposium on Computer Modeling and Simulation, EMS 2010, November 17-19, Pisa, Italy.

Ewald, Roland and Schulz, Rene and Uhrmacher, Adelinde M. (2010) Selecting Simulation Algorithm Portfolios by Genetic Algorithms. In: 24th ACM/IEEE/SCS Workshop on Principles of Advanced and Distributed Simulation, PADS 2010, May 17-19, Atlanta, Georgia, USA.

Bittig, Arne T. and Uhrmacher, Adelinde M. (2010) Spatial modeling in cell biology at multiple levels. In: Winter Simulation Conference, WSC 2010, December 5-8, Baltimore, Maryland, USA.

Bittig, Arne T. and Jeschke, Matthias and Uhrmacher, Adelinde M. (2010) Towards Modelling and Simulation of Crowded Environments in Cell Biology. In: ICNAAM 2010: International Conference of Numerical Analysis and Applied Mathematics 2010, September 19-25, Rhodes, Greece.

Maus, Carsten and John, Mathias and Rybacki, Stefan and Uhrmacher, Adelinde M. (2010) Towards Rule-Based Multi-Level Modeling. In: 11th International Conference on Systems Biology (ICSB 2010), October 10-15, Edinburgh, UK.

Rybacki, Stefan and Himmelspach, Jan and Seib, Enrico and Uhrmacher, Adelinde M. (2010) Using workflows in M&S software. In: Proceedings of the 2010 Winter Simulation Conference, WSC 2010, December 5-8, Baltimore, Maryland, USA.

Leye, Stefan and Uhrmacher, Adelinde M. (2010) A flexible and extensible architecture for experimental model validation. In: 3rd International Conference on Simulation Tools and Techniques, SIMUTools '10, March 16-18, Malaga, Spain.

Haack, Fiete and Leye, Stefan and Uhrmacher, Adelinde M. (2010) A flexible architecture for modeling and simulation of diffusional association. In: 3rd Workshop From Biology To Concurrency and back, FBTC 2010, March 27th, Paphos, Cyprus.

Leye, Stefan and John, Mathias and Uhrmacher, Adelinde M. (2010) A flexible architecture for performance experiments with the pi-Calculus and its extensions. In: 3rd International Conference on Simulation Tools and Techniques,SIMUTOOLS 2010, March 15 - 19, Malaga, Spain.

Marquardt, Florian and Uhrmacher, Adelinde M. (2009) An AI-Planning based Service Composition Architecture for Ambient Intelligence. In: Workshops Proceedings of the 5th International Conference on Intelligent Environments, Barcelona, Spain, 19th of July, 2009.

Ewald, Roland and Uhrmacher, Adelinde M. (2009) Automating the Runtime Performance Evaluation of Simulation Algorithms. In: Proceedings of the 2009 Winter Simulation Conference, WSC 2009, December 13-16, Austin, TX, USA.

Marquardt, Florian and Uhrmacher, Adelinde M. (2009) Creating AI Planning Domains for Smart Environments Using PDDL. In: International Conference on Intelligent Interactive Assistance and Mobile Multimedia Computing IMC 2009), November 9-11, Rostock-Warnemünde, Germany.

Ewald, Roland and Uhrmacher, Adelinde M. and Saha, Kaustav (2009) Data mining for simulation algorithm selection. In: nd International Conference on Simulation Tools and Techniques for Communications, Networks and Systems, SimuTools 2009, March 2-6, Rome, Italy.

Leye, Stefan and Himmelspach, Jan and Uhrmacher, Adelinde M. (2009) A Discussion on Experimental Model Validation. In: Proceedings of the UKSim'11, International Conference on Computer Modelling and Simulation, March 25-27, Cambridge, UK.

Ewald, Roland and Leye, Stefan and Uhrmacher, Adelinde M. (2009) An Efficient and Adaptive Mechanism for Parallel Simulation Replication. In: 23rd International Workshop on Principles of Advanced and Distributed Simulation, PADS 2009, June 22-25, Lake Placid, New York, USA.

Wang, Bing and Himmelspach, Jan and Ewald, Roland and Yao, Yiping and Uhrmacher, Adelinde M. (2009) Experimental Analysis of Logical Process Simulation Algorithms in JAMES II. In: Winter Simulation Conference, WSC 2009, December 13-16, Austin, TX, USA.

Rybacki, Stefan and Himmelspach, Jan and Uhrmacher, Adelinde M. (2009) Experiments with Single Core, Multi-core, and GPU Based Computation of Cellular Automata. In: 2009 First International Conference on Advances in System Simulation (SIMUL 2009), September 20-25, Porto, Portugal.

Mazemondet, Orianne and John, Mathias and Maus, Carsten and Uhrmacher, Adelinde M. and Rolfs, Arndt (2009) Integrating Diverse Reaction Types into Stochastic Models - A Signaling Pathway Case Study in the Imperative π-Calculus. In: Winter Simulation Conference, WSC 2009, December 13-16, Austin, TX, USA.

John, Mathias and Schulz, Hans-Jörg and Schumann, Heidrun and Uhrmacher, Adelinde M. and Unger, Andrea (2009) Interactive Poster: Exploring Time-Varying Hypergraphs. In: InfoVis 2009, October 11-16, Atlantic City, NJ, USA.

Himmelspach, Jan and Uhrmacher, Adelinde M. (2009) The JAMES II Framework for Modeling and Simulation. In: 2009 International Workshop on High Performance Computational Systems Biology (HiBi 2009), October 14-16, Trento, Italy.

Zinn, Sabine and Himmelspach, Jan and Gampe, Jutta and Uhrmacher, Adelinde M. (2009) MIC-core: A Tool for Microsimulation. In: Proceedings of the 2009 Winter Simulation Conference, WSC 2009, December 13-16, Austin, TX, USA.

Gampe, Jutta and Zinn, Sabine and Willekens, Frans and van der Gaag, Nicole and de Beer, Joop and Himmelspach, Jan and Uhrmacher, Adelinde M. (2009) The Microsimulation Tool of the MicMac-Project. In: The 2nd General Conference of the International Microsimulation Association, June 8-10, Ottawa, Canada.

Mazemondet, Orianne and John, Mathias and Maus, Carsten and Uhrmacher, Adelinde M. and Rolfs, Arndt (2009) Modeling the Cell Cycle Dependency of the Wnt/β-catenin Signaling Pathway in the Imperative π-Calculus. In: CMSB 2009: 7th International Conference on Computational Methods in Systems Biology, August 31 - September 1, Bologna, Italy.

Plociennik, Christiane and Burghardt, Christoph and Marquardt, Florian and Kirste, Thomas and Uhrmacher, Adelinde M. (2009) Modelling Device Actions in Smart Environments. In: International Conference on Intelligent Interactive Assistance and Mobile Multimedia Computing IMC 2009), November 9-11, Rostock-Warnemünde, Germany.

Ewald, Roland and Himmelspach, Jan and Jeschke, Matthias and Leye, Stefan and Uhrmacher, Adelinde M. (2009) Performance Issues in Evaluating Models and Designing Simulation Algorithms. In: 2009 International Workshop on High Performance Computational Systems Biology (HiBi 2009), October 14-16, Trento, Italy.

Bohk, Christina and Ewald, Roland and Uhrmacher, Adelinde M. (2009) Probabilistic Population Projection with JAMES II. In: Proceedings of the 2009 Winter Simulation Conference, WSC 2009, Hilton Austin Hotel, Austin, TX, USA, December 13-16, 2009.

Uhrmacher, Adelinde M. and Schulz, Hans-Jörg and Schumann, Heidrun and Schwabe, Lars and Timmermann, Dirk (2009) Regenerative systems: challenges and opportunities for modeling, simulation, and visualization. In: 4th International Conference on Performance Evaluation Methodologies and Tools, VALUETOOLS '09, Pisa, Italy, October 20-22, 2009.

Maus, Carsten and Jeschke, Matthias and Uhrmacher, Adelinde M. (2009) Spatial Multi-Level Modelling and Simulation for Systems Biology. In: CMSB 2009: 7th International Conference on Computational Methods in Systems Biology, August 31 - September 1, Bologna, Italy.

Marquardt, Florian and Uhrmacher, Adelinde M. (2009) Toward Unobtrusive Service Composition in Smart Environments based on AI Planning. In: 23th Workshop Planning, Scheduling, Design, and Configuration (PuK 2009), September 15-18, Paderborn, Germany.

Himmelspach, Jan and Uhrmacher, Adelinde M. (2009) What contributes to the quality of simulation results? In: 2009 INFORMS Simulation Society Research Workshop, June 25-27, Coventry, U.K.

Wang, Bing and Himmelspach, Jan and Ewald, Roland and Yao, Yiping and Uhrmacher, Adelinde M. (2009) An experimental analysis environment for logical process simulation algorithms. In: 2nd International Conference on Simulation Tools and Techniques for Communications, Networks and Systems, SimuTools 2009, March 2-6, Rome, Italy.

Ewald, Roland and Himmelspach, Jan and Uhrmacher, Adelinde M. (2008) An Algorithm Selection Approach for Simulation Systems. In: 22st International Workshop on Principles of Advanced and Distributed Simulation, PADS 2008, June 3-6, Rome, Italy.

John, Mathias and Lhoussaine, Cédric and Niehren, Joachim and Uhrmacher, Adelinde M. (2008) The Attributed Pi Calculus. In: 6th International Conference on Computational Methods in Systems Biology, CMSB 2008, October 12-15, Rostock, Germany.

Leye, Stefan and Uhrmacher, Adelinde M. and Priami, Corrado (2008) A Bounded-Optimistic, Parallel Beta-Binders Simulator. In: 12th IEEE/ACM International Symposium on Distributed Simulation and Real-Time Applications, 2008, October 27-29, Vancouver, BC, Canada.

Himmelspach, Jan and Röhl, Mathias and Uhrmacher, Adelinde M. (2008) Component-based models and simulation experiments for multi-agent systems in James II. In: 6th International Workshop: From Agent Theory to Agent Implementation, May 13, Estoril, Portugal.

Röhl, Mathias and Uhrmacher, Adelinde M. (2008) Definition and analysis of composition structures for discrete-event models. In: Winter Simulation Conference, WSC 2008, December 7-10, Miami, Florida, USA.

Marquardt, Florian and Uhrmacher, Adelinde M. (2008) Evaluating AI planning for service composition in smart environments. In: Proceedings of the 7th International Conference on Mobile and Ubiquitous Multimedia, MUM 2008, Umeå, Sweden, December 3-5, 2008.

Leye, Stefan and Himmelspach, Jan and Jeschke, Matthias and Ewald, Roland and Uhrmacher, Adelinde M. (2008) A Grid-Inspired Mechanism for Coarse-Grained Experiment Execution. In: 12th IEEE/ACM International Symposium on Distributed Simulation and Real-Time Applications, 2008, October 27-29, Vancouver, BC, Canada.

Maus, Carsten and John, Mathias and Röhl, Mathias and Uhrmacher, Adelinde M. (2008) Hierarchical Modeling for Computational Biology. In: Formal Methods for Computational Systems Biology, 8th International School on Formal Methods for the Design of Computer, Communication, and Software Systems, Advanced Lectures, June 2-7, Bertinoro, Italy.

Jeschke, Matthias and Uhrmacher, Adelinde M. (2008) Multi-resolution spatial simulation for molecular crowding. In: Winter Simulation Conference, WSC 2008, December 7-10, Miami, Florida, USA.

Uhrmacher, Adelinde M. and Himmelspach, Jan and Jeschke, Matthias and John, Mathias and Leye, Stefan and Maus, Carsten and Röhl, Mathias and Ewald, Roland (2008) One Modelling Formalism & Simulator Is Not Enough! A Perspective for Computational Biology Based on James II. In: 1st International Workshop Formal Methods in Systems Biology, FMSB 2008, June 4-5, Cambridge, UK.

Jeschke, Matthias and Park, Alfred and Ewald, Roland and Fujimoto, Richard and Uhrmacher, Adelinde M. (2008) Parallel and Distributed Spatial Simulation of Chemical Reactions. In: 22st International Workshop on Principles of Advanced and Distributed Simulation, PADS 2008, June 3-6, Roma, Italy.

Reisse, Christiane and Burghardt, Christoph and Marquardt, Florian and Kirste, Thomas and Uhrmacher, Adelinde M. (2008) Smart environments meet the semantic web. In: Proceedings of the 7th International Conference on Mobile and Ubiquitous Multimedia, MUM 2008, Umeå, Sweden, December 3-5, 2008.

Klan, Friederike and Röhl, Mathias and König-Ries, Birgitta and Uhrmacher, Adelinde M. (2008) Using context information to evaluate cooperativeness. In: Q2SWinet'08 - Proceedings of the 4th ACM Workshop on Q2S and Security for Wireless and Mobile Networks, Vancouver, British Columbia, Canada, October 27-28, 2008.

Himmelspach, Jan and Ewald, Roland and Uhrmacher, Adelinde M. (2008) A flexible and scalable experimentation layer. In: Winter Simulation Conference, WSC 2008, December 7-10, Miami, Florida, USA.

Ewald, Roland and Rossel, Johannes and Himmelspach, Jan and Uhrmacher, Adelinde M. (2008) A plug-in-based architecture for random number generation in simulation systems. In: Proceedings of the 2008 Winter Simulation Conference, Global Gateway to Discovery, WSC 2008, InterContinental Hotel, Miami, Florida, USA, December 7-10, 2008.

Uhrmacher, Adelinde M. and Ewald, Roland and John, Mathias and Maus, Carsten and Jeschke, Matthias and Biermann, Susanne (2007) Combining micro and macro-modeling in DEVS for computational biology. In: Proceedings of the Winter Simulation Conference, WSC 2007, Washington, DC, USA, December 9-12, 2007.

Röhl, Mathias and Uhrmacher, Adelinde M. and König-Ries, Birgitta (2007) An Experimental Frame for Evaluating Service Trading Overlays in Mobile ad-hoc Networks. In: MMS 2007: Mobilität und mobile Informationssysteme, 2nd conference of GI-Fachgruppe MMS, March 6th, 2007, Aachen, Germany.

Röhl, Mathias and Marquardt, Florian and Uhrmacher, Adelinde M. (2007) Exploiting web service techniques for composing simulation models. In: Proceedings of the Winter Simulation Conference, WSC 2007, Washington, DC, USA, December 9-12, 2007.

Uhrmacher, Adelinde M. (2007) Multiple Scales and Perspectives for Modeling and Simulation in Life Science Automation. In: 5th International Forum Live Science Automation 2007, October 28th - 30th, Lansdowne, VA, USA.

Himmelspach, Jan and Ewald, Roland and Leye, Stefan and Uhrmacher, Adelinde M. (2007) Parallel and distributed simulation of parallel DEVS models. In: Spring Simulation Conference (SpringSim'07), March 25-29, Norfolk, Virginia, USA.

Himmelspach, Jan and Uhrmacher, Adelinde M. (2007) Plug'n Simulate. In: Proceedings 40th Annual Simulation Symposium (ANSS-40 2007), 26-28 March 2007, Norfolk, Virginia, USA.

Unger, Andrea and Biermann, Susanne and John, Mathias and Uhrmacher, Adelinde M. and Schumann, Heidrun (2007) Visual support for modeling and simulation of cell biological systems. In: Proceedings of the Winter Simulation Conference, WSC 2007, Washington, DC, USA, December 9-12, 2007.

Himmelspach, Jan and Uhrmacher, Adelinde M. (2007) The event queue problem and PDevs. In: Spring Simulation Conference (SpringSim'07), March 25-29, Norfolk, Virginia, USA.

Nicol, David M. and Priami, Corrado and Nielson, Hanne Riis and Uhrmacher, Adelinde M. (2006) 06161 Abstracts Collection — Simulation and Verification of Dynamic Systems. In: Simulation and Verification of Dynamic Systems, 17.04. - 22.04.2006.

Nielson, Hanne Riis and Nicol, David M. and Priami, Corrado and Uhrmacher, Adelinde M. (2006) 06161 Executive Summary — Simulation and Verification of Dynamic Systems. In: Simulation and Verification of Dynamic Systems, 17.04. - 22.04.2006.

Batt, Grégory and Bradley, Jeremy T. and Ewald, Roland and Fages, François and Hermanns, Holger and Hillston, Jane and Kemper, Peter and Martens, Alke and Mosterman, Pieter J. and Nielson, Flemming and Sokolsky, Oleg and Uhrmacher, Adelinde M. (2006) 06161 Working Groups' Report: The Challlenge of Combining Simulation and Verification. In: Simulation and Verification of Dynamic Systems, 17.04. - 22.04.2006.

Sauro, Herbert M. and Harel, David and Kwiatkowska, Marta Z. and Shaffer, Clifford A. and Uhrmacher, Adelinde M. and Hucka, Michael and Mendes, Pedro and Strömbäck, Lena and Tyson, John J. (2006) Challenges for modeling and simulation methods in systems biology. In: Proceedings of the Winter Simulation Conference WSC 2006, Monterey, California, USA, December 3-6, 2006.

Röhl, Mathias and Uhrmacher, Adelinde M. (2006) Composing simulations from XML-specified model components. In: Proceedings of the Winter Simulation Conference WSC 2006, Monterey, California, USA, December 3-6, 2006.

Himmelspach, Jan and Lecca, Paola and Prandi, Davide and Priami, Corrado and Quaglia, Paola and Uhrmacher, Adelinde M. (2006) Developing An Hierarchical Simulator for Beta-binders. In: 20th IEEE/ACM/SCS Workshop on Principles of Advanced and Distributed Simulation, PADS 2006, Singapore, May 23-26, 2006.

Uhrmacher, Adelinde M. and Himmelspach, Jan and Röhl, Mathias and Ewald, Roland (2006) Introducing variable ports and multi-couplings for cell biological modeling in DEVS. In: Winter Simulation Conference, WSC 2006, December 3-6, Monterey, California, USA.

Gierke, Martina and Himmelspach, Jan and Röhl, Mathias and Uhrmacher, Adelinde M. (2006) Modeling and Simulation of Tests for Agents. In: Multiagent System Technologies, 4th German Conference, MATES 2006, Erfurt, Germany, September 19-20, 2006, Proceedings.

Uhrmacher, Adelinde M. (2006) Multi-Level Modeling and Simulation in Systems Biology — Promises and Challenges. In: 10th IEEE International Symposium on Distributed Simulation and Real-Time Applications (DS-RT 2006), 2-4 October 2006, Malaga, Spain.

Ewald, Roland and Gutzeit, Enrico and Schwanke, Sebastian and Uhrmacher, Adelinde M. and Lange, Christian and Biermann, Susanne and Maus, Carsten (2006) Multi-Level Modeling with DEVS - A Critical Inspection and Steps Towards a Feasible Approach. In: Winter Simulation Conference 2006 (WSC'2006), December 03-06, Monterey, CA, USA.

Ewald, Roland and Chen, Dan and Theodoropoulos, Georgios K. and Lees, Michael and Logan, Brian S. and Oguara, Ton and Uhrmacher, Adelinde M. (2006) Performance Analysis of Shared Data Access Algorithms for Distributed Simulation of Multi-Agent Systems. In: 20th IEEE/ACM/SCS Workshop on Principles of Advanced and Distributed Simulation, PADS 2006, Singapore, May 23-26, 2006.

Ewald, Roland and Himmelspach, Jan and Uhrmacher, Adelinde M. and Chen, Dan and Theodoropoulos, Georgios K. (2006) A Simulation Approach to Facilitate Parallel and Distributed Discrete-Event Simulator Development. In: 10th IEEE International Symposium on Distributed Simulation and Real-Time Applications (DS-RT 2006), 2-4 October 2006, Malaga, Spain.

Ewald, Roland and Himmelspach, Jan and Uhrmacher, Adelinde M. (2006) A non-fragmenting partitioning algorithm for hierarchical models. In: Proceedings of the Winter Simulation Conference WSC 2006, Monterey, California, USA, December 3-6, 2006.

Uhrmacher, Adelinde M. and Priami, Corrado (2005) Discrete Event Systems Specification in Systems Biology - A Discussion of Stochastic Pi calculius and DEVS. In: Winter Simulation Conference (WSC'2005), December 4-7, Orlando, FL, USA.

Röhl, Mathias and Uhrmacher, Adelinde M. (2005) Flexible integration of XML into modeling and simulation systems. In: Proceedings of the 37th Winter Simulation Conference, Orlando, FL, USA, December 4-7, 2005.

Himmelspach, Jan and Uhrmacher, Adelinde M. (2004) A Component-Based Simulation Layer for JAMES. In: 18th Workshop on Parallel and Distributed Simulation, PADS 2004, Kufstein, Austria, May 16-19, 2004.

Röhl, Mathias and Uhrmacher, Adelinde M. (2004) Controlled Experimentation with Agents - Models and Implementations. In: International Workshop on Engineering Societies in the Agents World V (ESAW 2004), October 20-22, Toulouse, France.

Martens, Alke and Uhrmacher, Adelinde M. (2004) A Formal Tutoring Process Model for Intelligent Tutoring Systems. In: Proceedings of the 16th Eureopean Conference on Artificial Intelligence, ECAI'2004, including Prestigious Applicants of Intelligent Systems, PAIS 2004, Valencia, Spain, August 22-27, 2004.

Martens, Alke and Uhrmacher, Adelinde M. (2004) Modeling of Tutoring Processes in Intelligent Tutoring Systems. In: KI 2004: Advances in Artificial Intelligence, 27th Annual German Conference on AI, KI 2004, Ulm, Germany, September 20-24, 2004, Proceedings.

Himmelspach, Jan and Uhrmacher, Adelinde M. (2004) Processing Dynamic PDEVS Models. In: 12th International Workshop on Modeling, Analysis, and Simulation of Computer and Telecommunication Systems (MASCOTS 2004), 4-8 October 2004, Vollendam, The Netherlands.

Uhrmacher, Adelinde M. and Degenring, Daniela and Lemcke, Jens and Krahmer, Mario (2004) Towards Reusing Model Components in Systems Biology. In: Computational Methods in Systems Biology, International Conference, CMSB 2004, Paris, France, May 26-28, 2004, Revised Selected Papers.

Degenring, Daniela and Röhl, Mathias and Uhrmacher, Adelinde M. (2003) Discrete Event Simulation for a Better Understanding of Metabolite Channeling - A System Theoretic Approach. In: Computational Methods in Systems Biology, First International Workshop, CMSB 2003, Roverto, Italy, February 24-26, 2003, Proceedings.

Himmelspach, Jan and Röhl, Mathias and Uhrmacher, Adelinde M. (2003) Next generation modeling III - agents: simulation for testing software agents - an exploration based on James. In: Proceedings of the 35th Winter Simulation Conference: Driving Innovation, New Orleans, Louisiana, USA, December 7-10, 2003.

Martens, Alke and Uhrmacher, Adelinde M. (2002) Adapting Learner Evaluation by Plans. In: Adaptive Hypermedia and Adaptive Web-Based Systems, Second International Conference, AH 2002, Malaga, Spain, May 29-31, 2002, Proceedings.

Martens, Alke and Uhrmacher, Adelinde M. (2002) Adaptive Tutoring Processes and Mental Plans. In: Intelligent Tutoring Systems, 6th International Conference, ITS 2002, Biarritz, France and San Sebastian, Spain, June 2-7, 2002, Proceedings.

Uhrmacher, Adelinde M. and Kullick, Bernd G. (2001) Interacting multi-agent and simulation systems: an exploration into mole and james. In: AGENTS '01 Proceedings of the fifth international conference on Autonomous agents, May 28. - June 01. 2001, Montreal, Canada.

Ören, Tuncer I. and Numrich, Susan K. and Uhrmacher, Adelinde M. and Wilson, Linda F. and Gelenbe, Erol (2000) Agent-directed simulation: challenges to meet defense and civilian requirements. In: Proceedings of the 32nd conference on Winter simulation, WSC 2000, Wyndham Palace Resort & Spa, Orlando, FL, USA, December 10-13, 2000.

Uhrmacher, Adelinde M. and Gugler, K. (2000) Distributed, parallel simulation of multiple, deliberative agents. In: Proceedings of the 14th Workshop on Parallel and Distributed Simulation, PADS 2000, Bologna, Italy, May 28-31, 2000.

Martens, Alke and Uhrmacher, Adelinde M. (2000) How to Execute a Tutoring Process. In: Annual Conference on Artificial Intelligence, Simulation and Planning in High Autonomy Systems, March 6-8, Tucson, AZ, USA.

Uhrmacher, Adelinde M. and Kullick, Bernd G. (2000) "Plug and test": software agents in virtual environments. In: Proceedings of the 32nd conference on Winter simulation, WSC 2000, Wyndham Palace Resort & Spa, Orlando, FL, USA, December 10-13, 2000.

Martens, Alke and Uhrmacher, Adelinde M. (1999) Modeling Tutoring As A Dynamic Process -- A Discrete Event Simulation Approach. In: European Simulation Multiconference ESM'99, June 1-4, Warsaw, Poland.

Uhrmacher, Adelinde M. and Schattenberg, Bernd (1998) Agents in Discrete Event Simulation. In: ESS'98 10th European Simulation Symposium, October 26-28, Nottingham, UK.

Uhrmacher, Adelinde M. and Tyschler, Petra and Tyschler, Dirk (1998) Modeling Mobile Agents. In: 1998 International Conference on Web-Based Modeling and Simulation, January 11-14, San Diego, CA, USA.

Seitz, Alexander and Uhrmacher, Adelinde M. (1998) The Treatment of Time in a Case-Based Analysis of Experimental Medical Studies. In: KI-98: Advances in Artificial Intelligence, 22nd Annual German Conference on Artificial Intelligence, Bremen, Germany, September 15-17, 1998, Proceedings.

Seitz, Alexander and Uhrmacher, Adelinde M. (1996) Fälle statt Modellwissen - Eine Anwendung auf dem Gebiet der Knochenheilung. In: 4th German Workshop on Case-Based Reasoning, März 20.-22.

Uhrmacher, Adelinde M. and Arnold, R (1994) Distributing and maintaining knowledge: agents in variable structure environments. In: The 5th Annual Conference on AI, Simulation and Planning in High Autonomy Systems - Distributed Interactive Simulation Environments, December 07-09, Gainesville,FL, USA.

Uhrmacher, Adelinde M. (1994) Fuzzy-basiertes Induktives Schliessen - Eine Analyse der Kohlendioxiddynamik in Biosphäre 2. In: GI-Fachgruppe Maschinelles Lernen.

Uhrmacher, Adelinde M. (1993) Variable structure models: autonomy and control answers from two different modeling approaches. In: The 4th Annual Conference on AI, Simulation and Planning in High Autonomy Systems - Integrating Virtual Reality and Model-Based Environments, September 20-22, Tucson, AZ, USA.

Uhrmacher, Adelinde M. (1992) Qualitative and Quantitative Simulation - Some Comparative Aspects. In: The 6th Conference on the Scientific Use of Statistical Software, April 7-12 1991, Heidelberg, Germany.

Uhrmacher, Adelinde M. (1991) EMSY-An Extended Modelling System. In: IMACS 13th World Congress on Computation and Applied Mathematics, July 22-26, Trinity College Dublin, Ireland.

Uhrmacher, Adelinde M. (1991) EMSY-Zur Objektorientierten Modellierung ökologischer Systeme. In: 5.Workshop Simulation und Künstliche Intelligenz, Mai 07-08, FhG IML, Dortmund, Germany.

Uhrmacher, Adelinde M. and Lorenz, Gudrun (1989) Anwendung von KI-Techniken zur Modellierung und Bewertung eines ökologischen Systems. In: 4. Symposium Informatik im Umweltschutz, November 06-08, Karlsruhe, Germany.

Lorenz, Gudrun and Uhrmacher, Adelinde M. and Simon, Karl-Heinz and Bossel, Hartmut (1989) Application of Artificial Intelligence Methods to the Representation and Modelling of Tree Growth. In: IUFRO Conference : Artificial Intelligence and Growth Models for Forest Management Decisions, September 18-22, Vienna, Austria.

Book

Uhrmacher, Adelinde M. (1992) EMSY - Ein Modellierungskonzept für ökologische und biologische Systeme unter besonderer Berücksichtigung ihrer dynamischen Veränderung. DISKI (20). Infix Verlag, Bonn St. Augustin. ISBN 3-929037-20-3

Other

Gilbert, David and Heiner, Monika and Takahashi, Koichi and Uhrmacher, Adelinde M. (2015) Multiscale Spatial Computational Systems Biology (Dagstuhl Seminar 14481). Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik, Dagstuhl, Germany.

Breitling, Rainer and Bruggeman, Frank J. and Priami, Corrado and Uhrmacher, Adelinde M. (2011) Formal Methods in Molecular Biology (Dagstuhl Seminar 11151). Schloss Dagstuhl--Leibniz-Zentrum für Informatik.

Heiner, Monika and Uhrmacher, Adelinde M. (2011) Special Issue on Foundations of formal reconstruction of biochemical networks. ELSEVIER.

Uhrmacher, Adelinde M. and John, Mathias and Mazemondet, Orianne and Unger, Andrea and Rharass, Tareck and Bader, Benjamin and Rolfs, Arndt (2009) Computer Science Meets Cell Biology - GRK dIEM oSiRiS. University of Rostock.

Uhrmacher, Adelinde M. and Rolfs, Arndt and Frahm, Jana (2007) DFG Research Training Group 1387/1: dIEM oSiRiS - Integrative Development of Modelling and Simulation Methods for Regenerative Systems (DFG Graduiertenkolleg 1387/1: dIEM oSiRiS - Die integrative Entwicklung von Modellierungs- und Simulationsmethoden für regenerative Systeme). DE GRUYTER Oldenbourg.

Uhrmacher, Adelinde M. and Kuttler, Céline (2006) Multi-Level Modeling in Systems Biology by Discrete Event Approaches (Mehrebenen-Modellierung in der Systembiologie innerhalb diskret-ereignisbasierter Ansätze). DE GRUYTER Oldenbourg.

Cho, Kwang-Hyun and Uhrmacher, Adelinde M. and Wolkenhauer, Olaf (2003) Introduction to the Special Issue on Systems Biology and Simulation. SAGE Publisching.

Uhrmacher, Adelinde M. and Fishwick, Paul A. and Zeigler, Bernard P. (2001) Special Issue on Agents in Modeling and Simulation: Exploiting the Metaphor. Institute of Electrical and Electronics Engineers ( IEEE ).

This list was generated on Fri Jul 21 02:35:22 2017 CEST.